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1.
Zool Res ; 44(6): 1052-1063, 2023 Nov 18.
Artículo en Inglés | MEDLINE | ID: mdl-37872006

RESUMEN

Widespread species that inhabit diverse environments possess large population sizes and exhibit a high capacity for environmental adaptation, thus enabling range expansion. In contrast, narrow-range species are confined to restricted geographical areas and are ecologically adapted to narrow environmental conditions, thus limiting their ability to expand into novel environments. However, the genomic mechanisms underlying the differentiation between closely related species with varying distribution ranges remain poorly understood. The Niviventer niviventer species complex (NNSC), consisting of highly abundant wild rats in Southeast Asia and China, offers an excellent opportunity to investigate these questions due to the presence of both widespread and narrow-range species that are phylogenetically closely related. In the present study, we combined ecological niche modeling with phylogenetic analysis, which suggested that sister species cannot be both widespread and dominant within the same geographical region. Moreover, by assessing heterozygosity, linkage disequilibrium decay, and Tajima's D analysis, we found that widespread species exhibited higher genetic diversity than narrow-range species. In addition, by exploring the "genomic islands of speciation", we identified 13 genes in highly divergent regions that were shared by the two widespread species, distinguishing them from their narrow-range counterparts. Functional annotation analysis indicated that these genes are involved in nervous system development and regulation. The adaptive evolution of these genes likely played an important role in the speciation of these widespread species.


Asunto(s)
Ambiente , Murinae , Ratas , Animales , Filogenia , Murinae/genética , China , Genómica
3.
Plants (Basel) ; 12(17)2023 Aug 31.
Artículo en Inglés | MEDLINE | ID: mdl-37687380

RESUMEN

BACKGROUND: Crop yields have been affected by many different biotic and abiotic factors. Generally, plants experience more than one stress during their life cycle, and plants can tolerate multiple stresses and develop cross-tolerance. The expected rise in atmospheric CO2 concentration ([CO2]) can contribute to cross-tolerance. Priming is a strategy to increase yield or to maintain yield under stress conditions. Thus, our objective was to evaluate if priming the rice plants with water deficit during the vegetative stage can induce tolerance to heat stress at anthesis and to evaluate the contribution of e[CO2]. METHODS: The experiment was arranged in a completely randomized design in a factorial arrangement. Factor A consisted of the following treatments: water deficit at four-leaf stage (no-stress, and drought stress), heat at anthesis (normal temperature, high temperature), and priming with water deficit at four-leaf stage and heat stress at anthesis; and Factor B was two [CO2] treatments: a[CO2] = 400 ± 40 µmol mol-1 and e[CO2] = 700 ± 40 µmol mol-1. We assessed the effect of the treatments on plant growth, yield, biochemical, and transcriptome alterations. RESULTS: Although e[CO2] affected rice growth parameters, it did not affect the priming effect. Primed plants showed an increase in yield and number of panicles per plant. Primed plants showed upregulation of OsHSP16.9A, OsHSP70.1, and OsHSP70.6. These results showed induced cross-tolerance. CONCLUSIONS: Water deficit at the rice vegetative stage reduces the effect of heat stress at the reproductive stage. Water deficit at the vegetative stage can be used, after further testing in field conditions, to reduce the effect of heat stress during flowering in rice.

4.
BMC Biol ; 21(1): 182, 2023 08 30.
Artículo en Inglés | MEDLINE | ID: mdl-37649052

RESUMEN

BACKGROUND: Environmental conditions vary among deserts across the world, spanning from hyper-arid to high-elevation deserts. However, prior genomic studies on desert adaptation have focused on desert and non-desert comparisons overlooking the complexity of conditions within deserts. Focusing on the adaptation mechanisms to diverse desert environments will advance our understanding of how species adapt to extreme desert environments. The hairy-footed jerboas are well adapted to diverse desert environments, inhabiting high-altitude arid regions, hyper-arid deserts, and semi-deserts, but the genetic basis of their adaptation to different deserts remains unknown. RESULTS: Here, we sequenced the whole genome of 83 hairy-footed jerboas from distinct desert zones in China to assess how they responded under contrasting conditions. Population genomics analyses reveal the existence of three species in hairy-footed jerboas distributed in China: Dipus deasyi, Dipus sagitta, and Dipus sowerbyi. Analyses of selection between high-altitude desert (elevation ≥ 3000m) and low-altitude desert (< 500m) populations identified two strongly selected genes, ATR and HIF1AN, associated with intense UV radiation and hypoxia in high-altitude environments. A number of candidate genes involved in energy and water homeostasis were detected in the comparative genomic analyses of hyper-arid desert (average annual precipitation < 70mm) and arid desert (< 200mm) populations versus semi-desert (> 360mm) populations. Hyper-arid desert animals also exhibited stronger adaptive selection in energy homeostasis, suggesting water and resource scarcity may be the main drivers of desert adaptation in hairy-footed jerboas. CONCLUSIONS: Our study challenges the view of deserts as homogeneous environments and shows that distinct genomic adaptations can be found among desert animals depending on their habitats.


Asunto(s)
Aclimatación , Roedores , Animales , Secuenciación Completa del Genoma , Ambiente , Altitud
5.
Commun Biol ; 6(1): 33, 2023 01 12.
Artículo en Inglés | MEDLINE | ID: mdl-36635382

RESUMEN

Phenotypes associated with metabolism and water retention are thought to be key to the adaptation of desert species. However, knowledge on the genetic changes and selective regimes on the similar and divergent ways to desert adaptation in sympatric and phylogenetically close desert organisms remains limited. Here, we generate a chromosome level genome assembly for Northern three-toed jerboa (Dipus sagitta) and three other high-quality genome assemblies for Siberian jerboa (Orientallactaga sibirica), Midday jird (Meriones meridianus), and Desert hamster (Phodopus roborovskii). Genomic analyses unveil that desert adaptation of the four species mainly result from similar metabolic pathways, such as arachidonic acid metabolism, thermogenesis, oxidative phosphorylation, insulin related pathway, DNA repair and protein synthesis and degradation. However, the specific evolved genes in the same adaptative molecular pathway often differ in the four species. We also reveal similar niche selection but different demographic histories and sensitivity to climate changes, which may be related to the diversified genomic adaptative features. In addition, our study suggests that nocturnal rodents have evolved some specific adaptative mechanism to desert environments compared to large desert animals. Our genomic resources will provide an important foundation for further research on desert genetic adaptations.


Asunto(s)
Aclimatación , Adaptación Fisiológica , Cricetinae , Animales , Adaptación Fisiológica/genética , Termogénesis , Gerbillinae , Demografía
6.
Mol Biol Evol ; 40(1)2023 01 04.
Artículo en Inglés | MEDLINE | ID: mdl-36562771

RESUMEN

Rare and geographically restricted species may be vulnerable to genetic effects from inbreeding depression in small populations or from genetic swamping through hybridization with common species, but a third possibility is that selective gene flow can restore fitness (genetic rescue). Climate-sensitive pikas (Ochotona spp.) of the Qinghai-Tibetan Plateau (QHTP) and its vicinity have been reduced to residual populations through the movement of climatic zones during the Pleistocene and recent anthropogenic disturbance, whereas the plateau pika (O. curzoniae) remains common. Population-level whole-genome sequencing (n = 142) of six closely related species in the subgenus Ochotona revealed several phases of ancient introgression, lineage replacement, and bidirectional introgression. The strength of gene flow was the greatest from the dominant O. curzoniae to ecologically distinct species in areas peripheral to the QHTP. Genetic analyses were consistent with environmental reconstructions of past population movements. Recurrent periods of introgression throughout the Pleistocene revealed an increase in genetic variation at first but subsequent loss of genetic variation in later phases. Enhanced dispersion of introgressed genomic regions apparently contributed to demographic recovery in three peripheral species that underwent range shifts following climate oscillations on the QHTP, although it failed to drive recovery of northeastern O. dauurica and geographically isolated O. sikimaria. Our findings highlight differences in timescale and environmental background to determine the consequence of hybridization and the unique role of the QHTP in conserving key evolutionary processes of sky island species.


Asunto(s)
Lagomorpha , Animales , Lagomorpha/genética , Evolución Biológica , Hibridación Genética , Genómica , Demografía
7.
Front Genet ; 13: 1020789, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-36506315

RESUMEN

High-altitude environments impose intense stresses on living organisms and drive striking phenotypic and genetic adaptations, such as hypoxia resistance, cold tolerance, and increases in metabolic capacity and body mass. As one of the most successful and dominant mammals on the Qinghai-Tibetan Plateau (QHTP), the plateau pika (Ochotona curzoniae) has adapted to the extreme environments of the highest altitudes of this region and exhibits tolerance to cold and hypoxia, in contrast to closely related species that inhabit the peripheral alpine bush or forests. To explore the potential genetic mechanisms underlying the adaptation of O. curzoniae to a high-altitude environment, we sequenced the heart tissue transcriptomes of adult plateau pikas (comparing specimens from sites at two different altitudes) and Gansu pikas (O. cansus). Differential expression analysis and weighted gene co-expression network analysis (WGCNA) were used to identify differentially expressed genes (DEGs) and their primary functions. Key genes and pathways related to high-altitude adaptation were identified. In addition to the biological processes of signal transduction, energy metabolism and material transport, the identified plateau pika genes were mainly enriched in biological pathways such as the negative regulation of smooth muscle cell proliferation, the apoptosis signalling pathway, the cellular response to DNA damage stimulus, and ossification involved in bone maturation and heart development. Our results showed that the plateau pika has adapted to the extreme environments of the QHTP via protection against cardiomyopathy, tissue structure alterations and improvements in the blood circulation system and energy metabolism. These adaptations shed light on how pikas thrive on the roof of the world.

8.
Proc Natl Acad Sci U S A ; 119(49): e2207845119, 2022 12 06.
Artículo en Inglés | MEDLINE | ID: mdl-36442115

RESUMEN

Asia's rich species diversity has been linked to its Cenozoic geodiversity, including active mountain building and dramatic climatic changes. However, prior studies on the diversification and assembly of Asian faunas have been derived mainly from analyses at taxonomic or geographic scales too limited to offer a comprehensive view of this complex region's biotic evolution. Here, using the class Mammalia, we built historical biogeographic models drawn on phylogenies of 1,543 species occurring across Asia to investigate how and when the mammal diversity in Asian regions and mountain hotspots was assembled. We explore the roles of in situ speciation, colonization, and vicariance and geoclimatic events to explain the buildup of Asia's regional mammal diversity through time. We found that southern Asia has served as the main cradle of Asia's mammal diversity. Present-day species richness in other regions is mainly derived from colonization, but by the Miocene, in situ speciation increased in importance. The high biodiversity present in the mountain hotspots (Himalayas and Hengduan) that flank the Qinghai-Tibetan plateau is a product of high colonization instead of in situ speciation, making them important centers of lineage accumulation. Overall, Neogene was marked by great diversification and migrations across Asia and surrounding continents but Paleogene environments already hosted rich mammal assemblages. Our study revealed that synchronous diversification bursts and biotic turnovers are temporally associated with tectonic events (mountain building, continental collisions) and drastic reorganization of climate (aridification of Asian interior, intensification of Asian monsoons, sea retreat) that took place throughout the Cenozoic in Asia.


Asunto(s)
Biodiversidad , Mamíferos , Animales , Humanos , Mamíferos/genética , Asia , Pueblo Asiatico , Clima
10.
Zootaxa ; 4974(1): 4778, 2021 May 19.
Artículo en Inglés | MEDLINE | ID: mdl-34186869

RESUMEN

Cabassous comprises armadillos lacking a full osteoderm cover in the tail, justifying its common name naked-tailed armadillos. In the only taxonomic revision of the genus, in 1980, four living species were recognized, including a polytypic taxon with two subspecies. Recent studies have questioned this classification, but a comprehensive taxonomic review is lacking. Here, we revise the taxonomy of the genus Cabassous using complementary morphological approaches and clarify the geographical limits of naked-tailed armadillo species. Based on qualitative and quantitative analyses, we recognize five living species: C. centralis, C. chacoensis, C. squamicaudis, C. unicinctus, and C. tatouay. Most of the species can be easily differentiated using external or cranial traits, except C. centralis and C. unicinctus, which share several morphological features. The scutes pattern on the cephalic shield is an important diagnostic feature in naked-tailed armadillos and can be easily applied in field studies. Cabassous squamicaudis and C. unicinctus were previously treated as subspecies but we show they have conspicuous diagnostic traits, without mixture of characters even in closer contact. Cabassous species can be classified as open-dwellers (C. chacoensis and C. squamicaudis), forest-dwellers (C. centralis and C. unicinctus), or of more generalist habits (C. tatouay). We designate a lectotype for C. unicinctus to preserve its long-term nomenclature use.


Asunto(s)
Armadillos/anatomía & histología , Armadillos/clasificación , Animales , Geografía
11.
Zootaxa ; 4979(1): 7094, 2021 May 28.
Artículo en Inglés | MEDLINE | ID: mdl-34187013

RESUMEN

Zootaxa came as a new and innovative publication medium for taxonomy, amidst a scenario of devaluation of this important biological science. After 20 years, it has ascertained itself as one of the main journals in animal taxonomy. However, the contribution of the journal to the taxonomy of Mammalia (mammals), one of the most studied groups of animals with a long-standing, dedicated spectrum of specialized journals (mammalogy), could have been expected as minor. All the current and former editors of the Mammalia section of Zootaxa analyzed the relative contribution of the journal to the description of new species of mammals since 2001. We also analyzed the contribution of Zootaxa by taxon, geographic origin of taxa, and geographic origin of first authors. The taxonomic methodology of authors in species description is described as well as the temporal trends in publications and publication subjects. We highlight the editors' picks and eventually, the challenges for the future. We found that Zootaxa has had a significant contribution to mammalogy, being the second journal (the first being Journal of Mammalogy) in terms of number of new species described (76; 10.6% of the new mammalian species described between 2001 and 2020). The majority of the new species were described following an integrative taxonomic approach with at least two sources of data (86%). The analysis of published taxa, their geographic origin, and the country of origin of first authors shows a wide coverage and exhaustive representation, except for the species from the Nearctic. We conclude that Zootaxa has likely responded to a repressed demand for an additional taxonomic journal in mammalogy, with as possible appeals the absence of publication fees and an established publication speed. With 246 articles published in the past 20 years, the Mammalia section of Zootaxa embraces a large spectrum of systematic subjects going beyond alpha taxonomy. The challenges for the future are to encourage publications of authors from the African continent, still poorly represented, and from the palaeontology community, as the journal has been open to palaeontology since its early days.


Asunto(s)
Mamíferos/clasificación , Animales , Publicaciones Periódicas como Asunto
12.
Mol Ecol ; 30(11): 2641-2658, 2021 06.
Artículo en Inglés | MEDLINE | ID: mdl-33817880

RESUMEN

Studying the genetic differentiation in a unique geographical area contributes to understanding the process of speciation. Here, we explore the spatial genetic structure and underlying formation mechanism of two congeneric small mammal species (Apodemus draco and A. chevrieri), which are mainly distributed in the mountains surrounding the lowland Sichuan Basin, southwest China. We applied a set of comparative phylogeographical analyses to determine their genetic diversification patterns, combining mitochondrial (Cytb and COI) and nuclear (microsatellite loci) markers, with dense sampling throughout the range (411 A. draco from 21 sites and 191 A. chevrieri from 22 sites). Moreover, we performed three complementary statistical methods to investigate the correlation between genotype and geographical and environmental components, and predicted the potential suitable distributional range under the present and historical climate conditions. Our results suggest that both species have experienced allopatric differentiation and admixture in historical periods, resulting in a ring-shape diversification, under the barrier effect of the Sichuan Basin. We infer that the tectonic events of the Qinghai-Tibetan Plateau and climatic oscillations during the Quaternary played an important role on the genetic divergence of the two species by providing environmental heterogeneity and geographical variation. Our study reveals a case of two sympatric small mammals following a ring-shaped diversification pattern and provides insight into the process of differentiation.


Asunto(s)
Variación Genética , Mamíferos , Animales , China , ADN Mitocondrial/genética , Mamíferos/genética , Filogenia , Filogeografía
13.
Proc Biol Sci ; 288(1949): 20210343, 2021 04 28.
Artículo en Inglés | MEDLINE | ID: mdl-33878923

RESUMEN

The observed patterns and underlying mechanisms of elevational beta-diversity have been explored intensively, but multi-dimensional comparative studies remain scarce. Herein, across distinct beta-diversity components, dimensions and species groups, we designed a multi-faceted comparative framework aiming to reveal the general rules in the observed patterns and underlying causes of elevational beta-diversity. We have found that: first, the turnover process dominated altitudinal patterns of species beta-diversity (ßsim > ßsne), whereas the nestedness process appeared relatively more important for elevational trait dissimilarity (ßfuncsim < ßfuncsne); second, the taxonomic turnover was relative higher than its phylogenetic and functional analogues (ßsim > ßphylosim/ßfuncsim), conversely, nestedness-resultant trait dissimilarity tended to be higher than the taxonomic and phylogenetic measures (ßfuncsne > ßsne/ßphylosne); and third, as elevational distance increased, the contradicting dynamics of environmental filtering and limiting similarity have jointly led the elevational patterns of beta-diversity, especially at taxonomic dimension. Based on these findings, we infer that the species turnover among phylogenetic relatives sharing similar functional attributes appears to be the main cause of shaping the altitudinal patterns of multi-dimensional beta-diversity. Owing to the methodological limitation in the randomization approach, currently, it remains extremely challenging to distinguish the influence of the neutral process from the offset between opposing niche-based processes. Despite the complexities and uncertainties during species assembling, with a multi-dimensional comparative perspective, this work offers us several important commonalities of elevational beta-diversity dynamics.


Asunto(s)
Biodiversidad , Fenotipo , Filogenia
14.
Zootaxa ; 4942(3): zootaxa.4942.3.1, 2021 Mar 15.
Artículo en Inglés | MEDLINE | ID: mdl-33757055

RESUMEN

Centropomus Lacépède, 1802 comprises 13 species of the fishes popularly knows as snooks, distributed in both Atlantic and Pacific coasts of America. Despite several studies on the group, conflicting taxonomic classifications still exist, including overlapping diagnostic characters, rendering species diagnoses extremely difficult. Herein, we review the taxonomy of Centropomus to elucidate species identities, redefine their diagnoses and to assess interspecific relationships based on the examination of 376 specimens. The study included complementary approaches, as analyses of external morphologic characters, linear and geometric morphometrics, and molecular analyses. Forty-nine characters were used for external morphology, 17 discrete plus 32 linear measurements. Shape and size were analyzed through geometric morphometrics of 185 specimens in lateral view. Partial sequences of the gene cytochrome c oxidase I were obtained for 129 specimens representing 11 species. Based on the consistent results retrieved from the morphologic and molecular analyses, we recognized six species of Centropomus from the Atlantic coast (C. ensiferus, C. irae, C. parallelus, C. pectinatus, C. poeyi and C. undecimalis). Centropomus mexicanus is treated as a junior synonym of C. parallelus. Six species from the Pacific coast are also tentatively recognized (C. armatus, C. medius, C. nigrescens, C. robalito, C. unionensis, and C. viridis), however further studies on the Pacific species are still needed. Information on type material, diagnosis, distribution, and taxonomic comments are provided for each species. An identification key to the species of Centropomus is presented.


Asunto(s)
Perciformes , Animales , Peces , Perciformes/genética
15.
Mol Biol Evol ; 38(5): 1905-1923, 2021 05 04.
Artículo en Inglés | MEDLINE | ID: mdl-33386846

RESUMEN

For organisms to survive and prosper in a harsh environment, particularly under rapid climate change, poses tremendous challenges. Recent studies have highlighted the continued loss of megafauna in terrestrial ecosystems and the subsequent surge of small mammals, such as rodents, bats, lagomorphs, and insectivores. However, the ecological partitioning of these animals will likely lead to large variation in their responses to environmental change. In the present study, we investigated the evolutionary history and genetic adaptations of white-bellied rats (Niviventer Marshall, 1976), which are widespread in the natural terrestrial ecosystems in Asia but also known as important zoonotic pathogen vectors and transmitters. The southeastern Qinghai-Tibet Plateau was inferred as the origin center of this genus, with parallel diversification in temperate and tropical niches. Demographic history analyses from mitochondrial and nuclear sequences of Niviventer demonstrated population size increases and range expansion for species in Southeast Asia, and habitat generalists elsewhere. Unexpectedly, population increases were seen in N. eha, which inhabits the highest elevation among Niviventer species. Genome scans of nuclear exons revealed that among the congeneric species, N. eha has the largest number of positively selected genes. Protein functions of these genes are mainly related to olfaction, taste, and tumor suppression. Extensive genetic modification presents a major strategy in response to global changes in these alpine species.


Asunto(s)
Distribución Animal , Cambio Climático , Especiación Genética , Murinae/genética , Filogenia , Altitud , Animales , Clima , Filogeografía , Selección Genética
16.
Ecol Evol ; 10(19): 10899-10911, 2020 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-33072304

RESUMEN

Understanding how biodiversity components are related under different environmental factors is a fundamental challenge for ecology studies, yet there is little knowledge of this interplay among the biotas, especially small mammals, in karst mountain areas. Here, we examine the elevation patterns of the taxonomic diversity (TD), phylogenetic diversity (PD), and functional diversity (FD) of small mammals in a karst mountain area, the Wuling Mountains, Southwest China, and compare these patterns between taxa (Rodentia and Eulipotyphla) and scales (broad- and narrow-range species). We also disentangle the impacts of the human influence index, net primary productivity (NPP), normalized difference vegetation index (NDVI), annual precipitation (AP), and annual mean temperature (AMT) on these three facets of biodiversity by using structural equation modeling. We recorded a total of 39 small mammal species, including 26 rodents and 13 species of the order Eulipotyphla. Our study shows that the facets of biodiversity are spatially incongruent. Net primary productivity has a positive effect on the three facets for most groups, while the effect of the NDVI is negative for TD and PD in most groups. AMT temperature and AP have negative effects on FD and PD, whereas TD is dependent on the species range scale. The human influence index effect on TD and PD also depends on the species range scale. These findings provide robust evidence that the ecological drivers of biodiversity differ among different biotas and different range scales, and future research should use multifacet approach to determine biodiversity conservation strategies.

17.
An Acad Bras Cienc ; 92 Suppl 2: e20191004, 2020.
Artículo en Inglés | MEDLINE | ID: mdl-32813766

RESUMEN

An updated and annotated checklist of mammals occurring in Brazil is presented. A total of 751 native species, distributed in 249 genera, 51 families and 11 orders were recorded to the country. The Brazilian mammalian fauna shows an elevated rate of endemism (30%; 223 species). Among the species evaluated by IUCN (668 species; 90%), a total of 80 (10.6% of total mammalian fauna) are Threatened, 28 (3.9%) are considered as Near Threatened, two species (0.3%) are presumable Extinct, 96 (12.8%) are considered with Deficient Data for conservation and 462 (61.6%) are considered as Least Concern. Fifteen new species were described since the last national compilation (published in 2017), which associated to new records to the country and synonimizations resulted in an increment of 30 species. Eight non-native species were introduced to the country, including the recently established Asiatic cervids Rusa unicolor (sambar) and Axis axis (chital). Seven native species (five primates and two hystricomorph rodents) have been translocated from their areas of natural occurrence to other areas inside the country.


Asunto(s)
Lista de Verificación , Mamíferos , Animales , Brasil
18.
Nagy‐Reis, Mariana B.; Oshima, Júlia Emi de Faria; Kanda, Claudia Zukeran; Palmeira, Francesca Belem Lopes; Melo, Fabiano Rodrigues de; Morato, Ronaldo Gonçalves; Bonjorne, Lilian; Magioli, Marcelo; Leuchtenberger, Caroline; Rohe, Fabio; Lemos, Frederico Gemesio; Martello, Felipe; Alves‐Eigenheer, Milene; Silva, Rafaela Aparecida da; Santos, Juliana Silveira dos; Priante, Camila Fátima; Bernardo, Rodrigo; Rogeri, Patricia; Assis, Julia Camara; Gaspar, Lucas Pacciullio; Tonetti, Vinicius Rodrigues; Trinca, Cristiano Trapé; Ribeiro, Adauto de Souza; Bocchiglieri, Adriana; Hass, Adriani; Canteri, Adriano; Chiarello, Adriano Garcia; Paglia, Adriano Pereira; Pereira, Adriele Aparecida; Souza, Agnis Cristiane de; Gatica, Ailin; Medeiro, Akyllam Zoppi; Eriksson, Alan; Costa, Alan Nilo; González‐Gallina, Alberto; Yanosky, Alberto A; Cruz, Alejandro Jesus de la; Bertassoni, Alessandra; Bager, Alex; Bovo, Alex Augusto Abreu; Mol, Alexandra Cravino; Bezerra, Alexandra Maria Ramos; Percequillo, Alexandre; Vogliotti, Alexandre; Lopes, Alexandre Martins Costa; Keuroghlian, Alexine; Hartley, Alfonso Christopher Zúñiga; Devlin, Allison L.; Paula, Almir de; García‐Olaechea, Alvaro; Sánchez, Amadeo; Aquino, Ana Carla Medeiros Morato; Srbek‐Araujo, Ana Carolina; Ochoa, Ana Cecilia; Tomazzoni, Ana Cristina; Lacerda, Ana Cristyna Reis; Bacellar, Ana Elisa de Faria; Campelo, Ana Kellen Nogueira; Victoria, Ana María Herrera; Paschoal, Ana Maria de Oliveira; Potrich, Ana Paula; Gomes, Ana Paula Nascimento; Olímpio, Ana Priscila Medeiros; Costa, Ana Raissa Cunha; Jácomo, Anah Tereza de Almeida; Calaça, Analice Maria; Jesus, Anamélia Souza; Barban, Ananda de Barros; Feijó, Anderson; Pagoto, Anderson; Rolim, Anderson Claudino; Hermann, Andiara Paula; Souza, Andiara Silos Moraes de Castro e; Alonso, André Chein; Monteiro, André; Mendonça, André Faria; Luza, André Luís; Moura, André Luis Botelho; Silva, André Luiz Ferreira da; Lanna, Andre Monnerat; Antunes, Andre Pinassi; Nunes, André Valle; Dechner, Andrea; Carvalho, Andrea Siqueira; Novaro, Andres Jose; Scabin, Andressa Barbara; Gatti, Andressa; Nobre, Andrezza Bellotto; Montanarin, Anelise; Deffaci, Ângela Camila; Albuquerque, Anna Carolina Figueiredo de; Mangione, Antonio Marcelo; Pinto, Antonio Millas Silva; Pontes, Antonio Rossano Mendes; Bertoldi, Ariane Teixeira; Calouro, Armando Muniz; Fernandes, Arthur; Ferreira, Arystene Nicodemo; Ferreguetti, Atilla Colombo; Rosa, Augusto Lisboa Martins; Banhos, Aureo; Francisco, Beatriz da Silva de Souza; Cezila, Beatriz Azevedo; Beisiegel, Beatriz de Mello; Thoisy, Benoit de; Ingberman, Bianca; Neves, Bianca dos Santos; Pereira‐Silva, Brenda; Camargo, Bruna Bertagni de; Andrade, Bruna da Silva; Santos, Bruna Silva; Leles, Bruno; Campos, Bruno Augusto Torres Parahyba; Kubiak, Bruno Busnello; França, Bruno Rodrigo de Albuquerque; Saranholi, Bruno Henrique; Mendes, Calebe Pereira; Devids, Camila Cantagallo; Pianca, Camila; Rodrigues, Camila; Islas, Camila Alvez; Lima, Camilla Angélica de; Lima, Camilo Ribeiro de; Gestich, Carla Cristina; Tedesco, Carla Denise; Angelo, Carlos De; Fonseca, Carlos; Hass, Carlos; Peres, Carlos A.; Kasper, Carlos Benhur; Durigan, Carlos Cesar; Fragoso, Carlos Eduardo; Verona, Carlos Eduardo; Rocha, Carlos Frederico Duarte; Salvador, Carlos Henrique; Vieira, Carlos Leonardo; Ruiz, Carmen Elena Barragán; Cheida, Carolina Carvalho; Sartor, Caroline Charão; Espinosa, Caroline da Costa; Fieker, Carolline Zatta; Braga, Caryne; Sánchez‐Lalinde, Catalina; Machado, Cauanne Iglesias Campos; Cronemberger, Cecilia; Luna, Cecília Licarião; Vechio, Christine Del; Bernardo, Christine Steiner S.; Hurtado, Cindy Meliza; Lopes, Cíntia M.; Rosa, Clarissa Alves da; Cinta, Claudia Cristina; Costa, Claudia Guimaraes; Zárate‐Castañeda, Claudia Paola; Novaes, Claudio Leite; Jenkins, Clinton N.; Seixas, Cristiana Simão; Martin, Cristiane; Zaniratto, Cristiane Patrícia; López‐Fuerte, Cristina Fabiola; Cunha, Cristina Jaques da; Brito De‐Carvalho, Crizanto; Chávez, Cuauhtémoc; Santos, Cyntia Cavalcante; Polli, Daiana Jeronimo; Buscariol, Daiane; Carreira, Daiane Cristina; Galiano, Daniel; Thornton, Daniel; Ferraz, Daniel da Silva; Lamattina, Daniela; Moreno, Daniele Janina; Moreira, Danielle Oliveira; Farias, Danilo Augusto; Barros‐Battesti, Darci Moraes; Tavares, Davi Castro; Braga, David Costa; Gaspar, Denise Alemar; Friedeberg, Diana; Astúa, Diego; Silva, Diego Afonso; Viana, Diego Carvalho; Lizcano, Diego J.; Varela, Diego M.; Jacinavicius, Fernando de Castro; Andrade, Gabrielle Ribeiro de; Almeida, Maria Cristina Ferreira do Rosário; Onofrio, Valeria Castilho.
Ecology, v. 101, n. 11, e03128, nov. 2020
Artículo en Inglés | Sec. Est. Saúde SP, SESSP-IBPROD, Sec. Est. Saúde SP | ID: bud-3174

RESUMEN

Mammalian carnivores are considered a key group in maintaining ecological health and can indicate potential ecological integrity in landscapes where they occur. Carnivores also hold high conservation value and their habitat requirements can guide management and conservation plans. The order Carnivora has 84 species from 8 families in the Neotropical region: Canidae; Felidae; Mephitidae; Mustelidae; Otariidae; Phocidae; Procyonidae; and Ursidae. Herein, we include published and unpublished data on native terrestrial Neotropical carnivores (Canidae; Felidae; Mephitidae; Mustelidae; Procyonidae; and Ursidae). NEOTROPICAL CARNIVORES is a publicly available data set that includes 99,605 data entries from 35,511 unique georeferenced coordinates. Detection/non‐detection and quantitative data were obtained from 1818 to 2018 by researchers, governmental agencies, non‐governmental organizations, and private consultants. Data were collected using several methods including camera trapping, museum collections, roadkill, line transect, and opportunistic records. Literature (peerreviewed and grey literature) from Portuguese, Spanish and English were incorporated in this compilation. Most of the data set consists of detection data entries (n = 79,343; 79.7%) but also includes non‐detection data (n = 20,262; 20.3%). Of those, 43.3% also include count data (n = 43,151). The information available in NEOTROPICAL CARNIVORES will contribute to macroecological, ecological, and conservation questions in multiple spatio‐temporal perspectives. As carnivores play key roles in trophic interactions, a better understanding of their distribution and habitat requirements are essential to establish conservation management plans and safeguard the future ecological health of Neotropical ecosystems. Our data paper, combined with other largescale data sets, has great potential to clarify species distribution and related ecological processes within the Neotropics. There are no copyright restrictions and no restriction for using data from this data paper, as long as the data paper is cited as the source of the information used. We also request that users inform us of how they intend to use the data.

19.
Ciênc. rural (Online) ; 50(7): e20190821, 2020. tab, graf
Artículo en Inglés | LILACS-Express | LILACS | ID: biblio-1133282

RESUMEN

ABSTRACT: The use of imidazolinone-tolerant rice cultivars allows selective control of weedy rice and barnyardgrass. However, in many situations, there is a need to add herbicides from other chemical groups to increase the spectrum of weed control. In this sense, saflufenacil has the potential to be used in mixture with imidazolinone herbicides. This study aimed to evaluate the interaction effects of the imazapyr+imazapic and saflufenacil herbicides in weedy rice and barnyardgrass and to investigate their impacts on the yield of the irrigated rice cultivar Puitá INTA CL. To reach these aims, greenhouse and field experiments were carried out during two growing seasons, with herbicide treatments sprayed separately and in mixtures of saflufenacil with imazapyr+imazapic. Results showed that saflufenacil did not interfere with control of weedy rice and barnyardgrass obtained with imazapyr+imazapic. The D50 values of imazapyr+imazapic for weedy rice control were 14.5+5, 9.1+3 and 12.5+4.2 g ha-1of imazapyr+imazapic for combinations with 0, 3.06 and 6.12 g ha-1of saflufenacil, respectively. In the field experiments, all doses of imazapyr+imazapic applied isolated or in mixture with saflufenacil provided control levels barnyardgrass above 90% at 28 days after herbicides application. Furthermore, saflufenacil did not cause damage or loss in the yield of the rice crop when mixed with imazapyr+imazapic. The Puitá INTA CL rice cultivar was tolerant of the tested herbicides, whether applied alone or in mixture, reaching grain yield of 9.987 kg ha-1 when applied 42 g ha-1 of saflufenacil plus 147+49 g ha-1 of imazapyr+imazapic.


RESUMO: A utilização de cultivares de arroz tolerantes às imidazolinonas possibilita um controle seletivo de arroz-daninho. No entanto, em muitas situações existe a necessidade de adição de herbicidas de outros grupos químicos para aumentar o espectro de controle de plantas daninhas. Neste sentido, saflufenacil apresenta potencial para ser utilizado em mistura com herbicidas imidazolinonas. Este estudo teve como objetivo avaliar os efeitos da interação dos herbicidas imazapyr+imazapic e saflufenacil em arroz-daninho e capim-arroz; e averiguar os impactos sobre a produtividade do cultivar de arroz irrigado Puitá INTA CL. Para alcançar esses objetivos, foram realizados experimentos em casa de vegetação e a campo em duas estações de cultivo, com os tratamentos herbicidas aplicados separadamente e em misturas de saflufenacil com imazapyr+imazapic. Os resultados mostraram que a adição de saflufenacil não interferiu no controle de arroz-daninho e capim-arroz obtido com imazapyr+imazapic. Os valores D50 de imazapyr+imazapic para o controle de arroz-daninho foram 14,5+5; 9,1+3 e 12,5+4,2 g ha-1 de imazapyr+imazapic para combinações com 0; 3,06 e 6,12 g ha-1 de saflufenacil. No experimento de campo todas doses de imazapyr+imazapic, aplicadas isoladas ou em mistura, proveram níveis de controle de capim-arroz superiores a 90% aos 28 dias após a aplicação dos herbicidas. Além disso, saflufenacil não causou injúrias ou perda de rendimento da cultura do arroz quando misturado com imazapyr+imazapic. O cultivar Puitá INTA CL foi tolerante aos herbicidas testados, sejam aplicados isolados ou em mistura, atingindo uma produtividade de 9.987 Kg ha-1 quando aplicado 42 g ha-1 de saflufenacil mais 147+49 g ha-1 de imazapyr+imazapic.

20.
Ecol Evol ; 9(12): 7080-7095, 2019 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-31380035

RESUMEN

Species distributed along mountain slopes, facing contrasting habitats in short geographic scale, are of particular interest to test how ecologically based divergent selection promotes phenotypic and genetic disparities as well as to assess isolation-by-environment mechanisms. Here, we conduct the first broad comparative study of phenotypic variation along elevational gradients, integrating a large array of ecological predictors and disentangling population genetic driver processes. The skull form of nine ecologically distinct species distributed over a large altitudinal range (100-4200 m) was compared to assess whether phenotypic divergence is a common phenomenon in small mammals and whether it shows parallel patterns. We also investigated the relative contribution of biotic (competition and predation) and abiotic parameters on phenotypic divergence via mixed models. Finally, we assessed the population genetic structure of a rodent species (Niviventer confucianus) via analysis of molecular variance and FST along three mountain slopes and tested the isolation-by-environment hypothesis using Mantel test and redundancy analysis. We found a consistent phenotypic divergence and marked genetic structure along elevational gradients; however, the species showed mixed patterns of size and skull shape trends across mountain zones. Individuals living at lower altitudes differed greatly in both phenotype and genotype from those living at high elevations, while middle-elevation individuals showed more intermediate forms. The ecological parameters associated with phenotypic divergence along elevation gradients are partly related to species' ecological and evolutionary constraints. Fossorial and solitary animals are mainly affected by climatic factors, while terrestrial and more gregarious species are influenced by biotic and abiotic parameters. A novel finding of our study is that predator richness emerged as an important factor associated with the intraspecific diversification of the mammalian skull along elevational gradients, a previously overlooked parameter. Population genetic structure was mainly driven by environmental heterogeneity along mountain slopes, with no or a week spatial effect, fitting the isolation-by-environment scenario. Our study highlights the strong and multifaceted effects of heterogeneous steep habitats and ecologically based divergent selective forces in small mammal populations.

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